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The Internet Analysis Tools Registry
A listing of 157 image analysis tools available to the neuroscience community, hosted by the Center for Morphometric Analysis, Charlestown, MA |
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NeuroNames Ontologies
This section includes the NeuroNames ontology of human and macaque neuroanatomy, as well as the NeuroNames equivalents of terms used in canonical atlases of the mouse (Paxinos & Franklin, 2001; Hof et al., 2000; Dong, 2004) and the rat brain (Swanson, 2004). |
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Macaque Atlas Templates for Warping to MRI and PET Scans
Use these templates to locate boundaries of structures not visible in MRI or PET scans. Follow instructions to download templates into an image-processing application such as PhotoShop. |
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Macaque Atlas Templates for Mapping
Download these templates to map data for publication or web display. Follow instructions to download templates into an image-processing application such as PhotoShop. |
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Print Your Own Stereotaxic Atlas of the Macaque Brain
Printable images of coronal sections taken at 1mm intervals and referenced stereotaxically to the bicommissural line.
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Neuroanatomical Methods
Methods for creating a 3-D brain atlas include perfusion with methylene blue, conventional transcardiac perfusion technique, and a transcarotid method to obtain a fixed brain while leaving other tissues fresh for distribution. |
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Primate Brain Maps
The full set of templates for mapping, warping and stereotaxic application is available on a compact disk (CD-ROM) with the published atlas, Primate Brain Maps: Structure of the Macaque Brain (Martin & Bowden, 2000). |